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Multidrug-resistant bacteria compensate for the epistasis between resistances

dc.contributor.authorMoura de Sousa, Jorge
dc.contributor.authorBalbontín, Roberto
dc.contributor.authorDurão, Paulo
dc.contributor.authorGordo, Isabel
dc.date.accessioned2017-05-03T14:32:34Z
dc.date.available2017-05-03T14:32:34Z
dc.date.issued2017-04-18
dc.description.abstractMutations conferring resistance to antibiotics are typically costly in the absence of the drug, but bacteria can reduce this cost by acquiring compensatory mutations. Thus, the rate of acquisition of compensatory mutations and their effects are key for the maintenance and dissemination of antibiotic resistances. While compensation for single resistances has been extensively studied, compensatory evolution of multiresistant bacteria remains unexplored. Importantly, since resistance mutations often interact epistatically, compensation of multiresistant bacteria may significantly differ from that of single-resistant strains. We used experimental evolution, next-generation sequencing, in silico simulations, and genome editing to compare the compensatory process of a streptomycin and rifampicin double-resistant Escherichia coli with those of single-resistant clones. We demonstrate that low-fitness double-resistant bacteria compensate faster than single-resistant strains due to the acquisition of compensatory mutations with larger effects. Strikingly, we identified mutations that only compensate for double resistance, being neutral or deleterious in sensitive or single-resistant backgrounds. Moreover, we show that their beneficial effects strongly decrease or disappear in conditions where the epistatic interaction between resistance alleles is absent, demonstrating that these mutations compensate for the epistasis. In summary, our data indicate that epistatic interactions between antibiotic resistances, leading to large fitness costs, possibly open alternative paths for rapid compensatory evolution, thereby potentially stabilizing costly multiple resistances in bacterial populations.pt_PT
dc.description.sponsorshipFundação para a Ciência e a Tecnologia, European Research Council.pt_PT
dc.description.versioninfo:eu-repo/semantics/publishedVersionpt_PT
dc.identifier.citationMoura de Sousa J, Balbontı ́ n R, Dur ã o P, Gordo I (2017) Multidru g-resistant bacteria compensate for the epistasis between resistance s. PLoS Biol 15(4): e2001741. https://do i.org/ 10.1371/ journal.pbio.2001 741pt_PT
dc.identifier.doi10.1371/journal.pbio.2001741pt_PT
dc.identifier.urihttp://hdl.handle.net/10400.7/748
dc.language.isoengpt_PT
dc.peerreviewedyespt_PT
dc.publisherPublic Library of Sciencept_PT
dc.relationSFRH/BPD/109517/ 2015pt_PT
dc.relationEXPLORING ADAPTATION BEYOND FITNESS PEAKS
dc.relation.publisherversionhttp://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.2001741pt_PT
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/pt_PT
dc.subjectAntibiotic resistancept_PT
dc.subjectMicrobial mutationpt_PT
dc.subjectCloningpt_PT
dc.subjectEpistasispt_PT
dc.subjectMutationpt_PT
dc.subjectAntibioticspt_PT
dc.subjectStreptomycinpt_PT
dc.subjectBacterial evolutionpt_PT
dc.titleMultidrug-resistant bacteria compensate for the epistasis between resistancespt_PT
dc.typejournal article
dspace.entity.typePublication
oaire.awardTitleEXPLORING ADAPTATION BEYOND FITNESS PEAKS
oaire.awardURIinfo:eu-repo/grantAgreement/FCT//SFRH%2FBD%2F89151%2F2012/PT
oaire.citation.endPage24pt_PT
oaire.citation.issue4pt_PT
oaire.citation.startPage1pt_PT
oaire.citation.titlePLoS Biologypt_PT
oaire.citation.volume15pt_PT
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsopenAccesspt_PT
rcaap.typearticlept_PT
relation.isProjectOfPublication85cd72e1-1c33-480c-ae77-f1effb2ee9cc
relation.isProjectOfPublication.latestForDiscovery85cd72e1-1c33-480c-ae77-f1effb2ee9cc

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